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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs76165217 chr8:91846914 C/T PRHOXNB chr13:28552243-28562774:- 0.52 7.66 4.47E-10 Box Plot
ACC rs76210940 chr6:161526441 A/G PRHOXNB chr13:28552243-28562774:- 0.59 7.72 3.56E-10 Box Plot
ACC rs76276907 chr11:103747154 CA/C CXorf61 chrX:115592849-115594164:- 0.72 7.71 3.69E-10 Box Plot
ACC rs76315175 chr6:25380495 A/G TFDP3 chrX:132350697-132352376:- 0.94 10.32 3.43E-14 Box Plot
ACC rs76378400 chr5:120317167 C/A GAGE2D chrX:49207160-49214420:+ 1.22 11.62 4.6E-16 Box Plot
ACC rs7648368 chr3:1149562 A/G PRHOXNB chr13:28552243-28562774:- 0.57 7.78 2.86E-10 Box Plot
ACC rs76484841 chr17:32526391 T/C TFDP3 chrX:132350697-132352376:- 0.99 8.59 1.52E-11 Box Plot
ACC rs76523685 chr2:142861643 C/T PRHOXNB chr13:28552243-28562774:- 0.57 7.64 4.79E-10 Box Plot
ACC rs76571356 chr2:86820797 G/A PRHOXNB chr13:28552243-28562774:- 0.69 9.82 1.97E-13 Box Plot
ACC rs76580434 chr9:130744410 C/T PRAMEF16 chr1:13495254-13498260:+ 0.53 7.56 6.38E-10 Box Plot
ACC rs76589538 chr6:62267138 T/G PRHOXNB chr13:28552243-28562774:- 0.59 7.82 2.45E-10 Box Plot
ACC rs76792431 chr9:32344521 A/T PRHOXNB chr13:28552243-28562774:- 0.71 8.89 5.07E-12 Box Plot
ACC rs76879034 chr3:37647825 G/A OR5V1 chr6:29323007-29399744:- 0.59 8.78 7.54E-12 Box Plot
ACC rs76883664 chr8:4005703 G/A PRHOXNB chr13:28552243-28562774:- 0.55 7.53 7.06E-10 Box Plot
ACC rs76890172 chr8:112904093 G/A KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot